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3 results for forked starred repositories written in Nextflow
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jianhong / hicar

Forked from nf-core/hicar

This pipeline analyses data for HiCAR data, a robust and sensitive multi-omic co-assay for simultaneous measurement of transcriptome, chromatin accessibility and cis-regulatory chromatin contacts.

Nextflow 3 Updated Jul 16, 2025

mahesh-panchal / pipelines-nextflow

Forked from NBISweden/pipelines-nextflow

A set of workflows written in Nextflow for Genome Annotation.

Nextflow 2 Updated Jul 1, 2024

yuzhenpeng / rnaseq-1

Forked from nf-core/rnaseq

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

Nextflow 1 Updated Dec 17, 2021