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Achievement: Pull SharkAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

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broadinstitute / warp

Warp Analysis Research Pipelines

WDL 225 112 Updated Feb 5, 2026

ENCODE-DCC / long-read-rna-pipeline

ENCODE long read RNA-seq pipeline

WDL 51 13 Updated Jan 9, 2023

broadinstitute / PANOPLY

Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis Consortium (CPTAC)

WDL 37 16 Updated Dec 17, 2025

vgteam / vg_wdl

Workflow Description Language (WDL) scripts for common vg workflows

WDL 23 11 Updated Dec 15, 2025

gatk-workflows / intel-gatk4-germline-snps-indels

Workflows for germline short variant discovery with GATK4 optimized by Intel for on-premises infrastructure

WDL 4 4 Updated Aug 10, 2020