RNA-seq aligner

Advanced and Fast Data Transformation in R

TCR and BCR assembly from RNA-seq data

Single-cell Transcriptome and Regulome Analysis Pipeline

An ultra-fast and efficient genomic tool for coverage calculation

Efficient genotyping bi-allelic SNPs on single cells

Tools for working with BUS files

BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy visualization of commonly used DNA-seq capture based methods.