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LUMC (ex EMBL) @zellerlab
- The Hague, Netherlands
- https://orcid.org/0000-0002-3947-4444
- @althonos
Starred repositories
Iterative Gene clUster Analysis, a high-throughput method for gene cluster family identification.
Compressed, associative, and exact hash table for k-mers
A Rust port of the LinearFold algorithm for RNA secondary structure prediction
Homology-based ANI estimation at unprecedented scales
🎨 Toolkit for generating publication-quality plots for Cell, Nature and Science journals
Build protein families from sequence clusters by iterative HMM search over very large databases — streaming, deterministic, pyHMMER-based.
Query sequence database by HMMs arranged in predefined synteny structure
Third-party native Jellyfin client for PC/PS4/PSVita/Nintendo Switch
C++ library for programming the VideoCore GPU on all Raspberry Pi's.
AV1 re-encoding using ffmpeg, svt-av1 & vmaf.
Autogenerated Bytewise SIMD-Optimized Look-Up Tables
Dusklight brings a classic adventure to PC and mobile platforms with a variety of fixes and improvements.
A command-line tool for predicting K-antigen type classifications in Escherichia coli.
nemethviktor / 2ccts_revival
Forked from openttdcoop/2cctsOpenTTD Trains in 2 Company Colours [Revival]
Open ttd Narrow Gauge fast train SET is a set of trains that can run over 200 km/h on 1067mm narrow guage.
A Rust reimplementation of the MRtree algorithm for reconciling clustering labels from multiple resolutions into a consistent cluster hierarchy
Single-header c99 accelerated float/double parsing. Port of the fast_float library.
Python bindings to FragGeneScanRs for fast, error-tolerant bacterial ORF prediction
Automated quality control for genomic machine learning datasets: scores the biases, duplicates and data leakage a classifier could exploit before you train on it.
Python package to read and write R RData and Rds files into/from pandas dataframes. No R or other external dependencies required.