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Pull requests list

Add islower/isupper methods to Seq (#3753)
#3776 by erik-whiting was merged Nov 2, 2021 Loading…
3 tasks done
1
15
Add Support for DSSP v4.0
#3775 by cbalbin-bio was merged Aug 7, 2022 Loading…
3 tasks done
1
@JoaoRodrigues
5
internal-coords vector assembly update
#3774 by rob-miller was merged Jan 30, 2022 Loading…
2 of 3 tasks
7
Add __iter__ method to Seq objects to improve list performance #3772
#3773 by hypostulate was merged Nov 1, 2021 Loading…
3 tasks done
1
4
adjust test_GraphicsBitmaps.py for newer renderpm
#3767 by emollier was merged Oct 22, 2021 Loading…
2 of 3 tasks
2
Fix documentation to match implementation.
#3765 by kpalin was merged Oct 19, 2021 Loading…
1
Fix Exonerate text parser to correctly determine strand from ':[revcomp]'
#3761 by bow was merged Nov 18, 2021 Loading…
2 of 3 tasks
1
9
Tweaks to doctest syntax/style in Tutorial
#3759 by peterjc was merged Nov 9, 2021 Loading…
3 tasks done
14
[pre-commit.ci] autoupdate
#3758 by pre-commit-ci bot was merged Jan 4, 2022 Loading…
4
Fix ProteinAnalysis with mixed case sequence
#3756 by peterjc was closed Nov 22, 2022 Loading…
3 tasks done
3
Fix parsing BGZF files with internal empty block
#3755 by peterjc was merged Sep 28, 2021 Loading…
3 tasks done
3
nexus parser/writer for Bio.Align
#3754 by mdehoon was merged Oct 7, 2021 Loading…
3 tasks done
6
Stricter mode check in BgzfReader & full docstring
#3750 by peterjc was merged Sep 23, 2021 Loading…
3 tasks done
1
2
replace assert with if
#3749 by fabianegli was merged Sep 23, 2021 Loading…
3 tasks done
6
Add a parser for the PHYLIP format to Bio.Align.
#3745 by mdehoon was merged Sep 22, 2021 Loading…
3 tasks done
4
Tweaks to pre-commit.ci
#3744 by peterjc was closed Apr 23, 2023 Loading…
3 tasks done
5
Fix flake8/pydocstyle D412 regression
#3743 by peterjc was merged Sep 19, 2021 Loading…
3 tasks done
1
Added an import and a comment
#3742 by mglerner was merged Sep 19, 2021 Loading…
2 of 3 tasks
11
Adding msf parser to Bio.Align
#3739 by mdehoon was merged Sep 20, 2021 Loading…
3 tasks done
2
Entrez parser fix for #3734
#3738 by mdehoon was merged Sep 17, 2021 Loading…
3 tasks done
1
f-strings on Tests/
#3737 by peterjc was merged Sep 20, 2021 Loading…
3 tasks done
2
Even more f strings
#3736 by peterjc was merged Oct 8, 2021 Loading…
3 tasks done
2
More f-strings in Bio/ using flynt
#3735 by peterjc was merged Sep 17, 2021 Loading…
3 tasks done
4
bugfix for writing genpept with long ids.
#3733 by seanrjohnson was merged Oct 21, 2022 Loading…
3 tasks done
1
20
Exclude rather than mock problematic modules for API docs
#3731 by peterjc was merged Sep 20, 2021 Loading…
3 tasks done
1
ProTip! Updated in the last three days: updated:>2025-11-09.