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Starred repositories

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🎓 Path to a free self-taught education in Computer Science!

HTML 209,903 26,011 Updated Jul 14, 2026

f.k.a. Awesome ChatGPT Prompts. Share, discover, and collect prompts from the community. Free and open source — self-host for your organization with complete privacy.

HTML 172,688 22,148 Updated Oct 12, 2026

from vibe coding to agentic engineering - practice makes claude perfect

HTML 67,441 6,730 Updated Oct 12, 2026

A neural network that transforms a design mock-up into a static website.

HTML 16,534 1,542 Updated Aug 16, 2024

Responsive dashboard templates 📊✨

HTML 11,032 1,387 Updated Nov 2, 2021

Automagically reverse-engineer REST APIs via capturing traffic

HTML 9,644 377 Updated Oct 5, 2026

Make a cascading timeline from markdown-like text. Supports simple American/European date styles, ISO8601, images, links, locations, and more.

HTML 4,880 160 Updated Dec 11, 2023

Applied Computational Genomics Course at UU: Spring 2020

HTML 1,132 246 Updated Apr 5, 2024

Code and tutorials to visualise your data that is both beautiful *and* statistically valid

HTML 899 218 Updated Mar 27, 2023

An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

HTML 841 165 Updated May 20, 2026

A website that displays hundreds of R charts with their code

HTML 750 256 Updated Aug 19, 2026

Another Gtf/Gff Analysis Toolkit https://nbisweden.github.io/AGAT/

HTML 588 65 Updated Sep 7, 2026

Plotting scripts for long read sequencing data

HTML 561 52 Updated Oct 1, 2026

Collections of library structure and sequence of popular single cell genomic methods

HTML 511 112 Updated Apr 16, 2026

Easy Amplicon data analysis pipeline

HTML 376 136 Updated Apr 20, 2026

A collection of Galaxy-related training material

HTML 368 1,100 Updated Oct 12, 2026

SingleR: Single-cell RNA-seq cell types Recognition (legacy version)

HTML 348 97 Updated Jul 28, 2020

WebAssembly modules for genomics

HTML 277 28 Updated Oct 8, 2026

Robs manual for the computational genomics and bioinformatics class.

HTML 272 69 Updated Nov 12, 2024

dN/dS methods to quantify selection in cancer and somatic evolution

HTML 240 53 Updated Aug 25, 2026

Generate an interactive dot plot from mummer or minimap alignments

HTML 219 63 Updated Jan 17, 2024

Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

HTML 212 46 Updated Mar 19, 2021

Tools and pipelines tailored to using PacBio HiFi Reads for metagenomics

HTML 205 34 Updated Jul 31, 2026

Tool Shed repositories maintained by the Intergalactic Utilities Commission

HTML 202 537 Updated Oct 12, 2026

VCF visualization interface

HTML 184 50 Updated Oct 12, 2026

BSR-Based Allele Calling Algorithm

HTML 154 33 Updated Oct 8, 2026

Find clustered hits from a BLAST search

HTML 150 28 Updated Aug 6, 2026

Make colorful identity heatmaps of genomic sequence

HTML 140 15 Updated May 24, 2024

🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies

HTML 132 18 Updated Oct 11, 2026
HTML 127 29 Updated Aug 1, 2025
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