Your personal intelligence agent. Watches the world from multiple data sources and pings you when something changes.

An open-source long-horizon SuperAgent harness that researches, codes, and creates. With the help of sandboxes, memories, tools, skill, subagents and message gateway, it handles different levels of…

Universal Single-Cell Genomics Preprocessing package

crussmap is a faster tool to convert genome coordinates between difference reference assemblies.

Terminal protein structure viewer — interactive 3D visualization of PDB/mmCIF structures with cartoon ribbons, braille rendering, and Sixel/Kitty graphics

TabICLv2: A state-of-the-art tabular foundation model

A fully-automated quality control tool for parallel evaluation of genome assemblies

A genome assembly assessment pipeline.

Coordinate agent teams in Claude Code using a Royal Navy inspired command structure and operating procedures. It provides structured sailing orders, battle plans, action stations, and a captain's l…

Use Garry Tan's exact Claude Code setup: 15 opinionated tools that serve as CEO, Designer, Eng Manager, Release Manager, Doc Engineer, and QA

2+ genomes make a parTEA! This pangenome TE annotation pipeline extends EarlGrey for multi-genome comparative analysis

Publication-quality molecular graphics.

Rust bioinformatics crate aimed at Microbial genomics

DeepVariant for Linux ARM64 (Graviton, Ampere, RK3588, Jetson) with hardware-accelerated inference via ONNX Runtime + ACL. Open-source variant calling on cheap ARM cloud and edge hardware.

Dot: An interactive dot plot viewer for comparative genomics

Bioinformatics tool for DNA Dot Plot [bioinformatics training]

A Neural Network Model to Detect Bioactivities from AntiSMASH GBK Files

Google Workspace CLI — one command-line tool for Drive, Gmail, Calendar, Sheets, Docs, Chat, Admin, and more. Dynamically built from Google Discovery Service. Includes AI agent skills.

Telomere compliment tools

Alternative R Frontend — a modern R console written in Rust

Convert genbank files to a swath of other formats

A scientific plotting library in Rust

Prediction of apoplastic and cytoplasmic effectors in fungi and oomycetes

Automated taxonomy decoration onto a tree

A toolkit for analyzing and visualizing phylogenetic placement data