This is my personal account. I'm a bioinformatician at KWS SAAT SE. Nextflow, bioinformatics, metagenomics. My code is unfortunately mostly private.
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Starred repositories
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Graphical Fragment Assembly (GFA) Format Specification
ONT assembly and Illumina polishing pipeline
Filtering and profiling of next-generational sequencing data using region-specific rules
🪡Correct and scaffold assemblies using long reads
Collection of commonly used RDP Tools for easy building
⛰ covtobed | Convert the coverage track from a BAM file into a BED file