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This repository contains data indexes from NIST's Genome in a Bottle project.

Roff 274 69 Updated Nov 30, 2023

GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis rate of the sequencing sample. The estimated result can be u…

Roff 55 5 Updated Feb 27, 2020

Accelerated genomics workflows in NextFlow

Roff 45 11 Updated Sep 11, 2024

Domain based annotation of transposable elements

Roff 25 2 Updated Jul 21, 2026

Genome-on-Diet is a fast and memory-frugal framework for exemplifying sparsified genomics for read mapping, containment search, and metagenomic profiling. It is much faster & more memory-efficient …

Roff 18 4 Updated Sep 4, 2024

Singularity images

Roff 1 Updated Oct 27, 2020