Open source alternative to AWS. Elastic compute, block storage (non replicated), firewall and load balancer, managed Postgres, K8s, AI inference, and IAM services.

Effing package management! Build packages for multiple platforms (deb, rpm, etc) with great ease and sanity.

A command line tool that draw plots on the terminal.

Bash command line framework and CLI generator

Really simple JSON and XML parsing, ripped from Merb and Rails.

Web based LIMS

CLI tool to annotate genes with KOfam

Understand your transcriptome assembly

Smart VCF parser DSL

GeneValidator: Identify problems with predicted genes

Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-

Automated optimisation of de-novo transcriptome assembly

IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis

Library and tools to deal with polyploid genomics

A project to launch the galaxy docker image easily using ansible

Now replaced with a new website >>>