This is my personal account. I'm a bioinformatician at KWS SAAT SE. Nextflow, bioinformatics, metagenomics. My code is unfortunately mostly private.
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Starred repositories
6
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written in Julia
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What scientific programmers must know about CPUs and RAM to write fast code.
Julia package powering VIVA, our tool for visualization of genomic variation data. Manual:
An accurate and ultra-fast adapter and quality trimming program for Illumina Next-Generation Sequencing (NGS) data.
An ultra-sensitive and precise tool for characterizing T cell CDR3 sequences in TCR-seq and RNA-seq data.
In Development: Multiomic analysis and data integration for biological characterization, prediction, and design. Designed for linux-based HPC and cloud systems.