Skip to content
View colindaven's full-sized avatar
  • Germany

Block or report colindaven

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don't include any personal information such as legal names or email addresses. Markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse

Starred repositories

100 stars written in Java
Clear filter

All Algorithms implemented in Java

Java 65,310 21,045 Updated Apr 3, 2026

Open Source Identity and Access Management For Modern Applications and Services

Java 33,704 8,214 Updated Apr 4, 2026

Event Driven Orchestration & Scheduling Platform for Mission Critical Applications

Java 26,650 2,546 Updated Apr 3, 2026

The official home of the Presto distributed SQL query engine for big data

Java 16,677 5,534 Updated Apr 4, 2026

Access your entire server infrastructure from your local desktop

Java 13,956 534 Updated Apr 4, 2026

OpenRefine is a free, open source power tool for working with messy data and improving it

Java 11,793 2,133 Updated Apr 3, 2026

Apache NiFi

Java 6,040 2,935 Updated Apr 3, 2026

Apache Groovy: A powerful multi-faceted programming language for the JVM platform

Java 5,435 1,916 Updated Apr 4, 2026

RStudio is an integrated development environment (IDE) for R

Java 4,981 1,166 Updated Apr 3, 2026

Graphical Java application for managing BibTeX and BibLaTeX (.bib) databases

Java 4,310 3,318 Updated Apr 3, 2026

Official code repository for GATK versions 4 and up

Java 1,928 624 Updated Apr 3, 2026

Use Log4Shell vulnerability to vaccinate a victim server against Log4Shell

Java 1,697 109 Updated Dec 22, 2021

High Performance Software-Defined Block Storage for container, cloud and virtualisation. Fully integrated with Docker, Kubernetes, Openstack, Proxmox etc.

Java 1,218 92 Updated Mar 6, 2026

HiveMQ MQTT Client is an MQTT 5.0 and MQTT 3.1.1 compatible and feature-rich high-performance Java client library with different API flavours and backpressure support

Java 1,067 181 Updated Mar 29, 2026

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

Java 1,056 382 Updated Mar 24, 2026

Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

Java 726 405 Updated Apr 3, 2026

A public open sourced tool. Log4J scanner that detects vulnerable Log4J versions (CVE-2021-44228, CVE-2021-45046, etc) on your file-system within any application. It is able to even find Log4J inst…

Java 640 98 Updated Mar 10, 2022

A quality control analysis tool for high throughput sequencing data

Java 591 112 Updated Mar 20, 2026

Java utilities for Bioinformatics

Java 519 134 Updated Mar 25, 2026

Automatically exported from code.google.com/p/figtree

Java 462 118 Updated Mar 20, 2026

Genome-scale protein function classification

Java 374 74 Updated Mar 24, 2026

Helical Insight software is world’s first Open Source Business Intelligence framework which helps you to make sense out of your data and make well informed decisions.

Java 338 109 Updated Feb 22, 2023

RTG Tools: Utilities for accurate VCF comparison and manipulation

Java 334 52 Updated May 27, 2025
Java 297 80 Updated Mar 10, 2026

MISO: An open-source LIMS for NGS sequencing centres

Java 296 125 Updated Apr 2, 2026

Visualization and analysis software for Hi-C data -

Java 289 61 Updated Aug 6, 2024

GRIDSS: the Genomic Rearrangement IDentification Software Suite

Java 282 73 Updated May 21, 2025

Accurate Species TRee ALgorithm

Java 276 70 Updated Apr 1, 2024

Various algorithms for analysing genomics data

Java 270 66 Updated Apr 3, 2026

Jasmine: SV Merging Across Samples

Java 246 21 Updated Dec 20, 2024
Next