Lists (22)
Bioinformatics
181 repositories
Command Line Tools
Utilities to make life easier on the command line.43 repositories
Computational Biology
49 repositories
Data and Code for Publications
2 repositories
Data Visualization
64 repositories
Database Tools
4 repositories
Deep Learning
2 repositories
HLA
8 repositories
Learning Statistics
17 repositories
Mac apps
7 repositories
Matrix Factorization
6 repositories
nim-lang
3 repositories
PDF Tools
Tools for dealing with the PDF file format.1 repository
Python package development
19 repositories
R package development
35 repositories
Regression
9 repositories
Rust
13 repositories
Single-cell Genomics Analysis
61 repositories
Spatial Transcriptomics
2 repositories
Tools for Academic Research
Tools designed to advance academic research.39 repositories
Web App Development
Libraries, packages, tools, and resources for building web applications.204 repositories
WebAssembly
Web apps powered by WebAssembly1 repository
Starred repositories
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Statistical Data Analysis in Python
A collection of components that make it easy to build interactive charts with D3
A collaboratively written review paper on deep learning, genomics, and precision medicine
A frictionless, pipeable approach to dealing with summary statistics
Applied Computational Genomics Course at UU: Spring 2020
Data sets created for stories on The Pudding, open to the public.
Online Git Reference at http://git.github.io/git-reference/
DZSlides is a one-file HTML template to build slides in HTML5 and CSS3.
Beautiful and customizable model summaries in R.
Statistical Inference via Data Science: A ModernDive into R and the Tidyverse
Beautiful multilingual API documentation theme for Hugo
An extremely lightweight and powerful vanilla JavaScript completion suggester.
Code and Resources for "Feature Engineering and Selection: A Practical Approach for Predictive Models" by Kuhn and Johnson
papaja (Preparing APA Journal Articles) is an R package that provides document formats to produce complete APA manuscripts from RMarkdown-files (PDF and Word documents) and helper functions that fa…
Mixed-effects models in R using S4 classes and methods with RcppEigen
Create, edit and display a journal article, entirely in GitHub
R package to compute and plot predictions, slopes, marginal means, and comparisons (contrasts, risk ratios, odds, etc.) for over 100 classes of statistical and ML models. Conduct linear and non-lin…
Get protein embeddings from protein sequences
Collections of library structure and sequence of popular single cell genomic methods
Example R scripts and data for "Practical Data Science with R" 1st edition by Nina Zumel and John Mount (Manning Publications)