Machine learning for NeuroImaging in Python
-
Updated
Mar 27, 2026 - Python
#
brain-connectivity
Here are 45 public repositories matching this topic...
Python package for analysis and visualization of functional ultrasound imaging data.
python neuroscience data-visualization data-analysis neuroimaging ultrasound brain-connectivity fusi
-
Updated
Mar 27, 2026 - Python
Graph-based classification of Autism Spectrum Disorder from resting-state fMRI functional connectivity data (ABIDE dataset, n=303)
python machine-learning neuroscience abide autism fmri connectome brain-connectivity resting-state-fmri graph-neural-network
-
Updated
Mar 25, 2026 - Python
Methods for estimating time-varying functional connectivity (TVFC)
python machine-learning neuroimaging fmri gaussian-processes nilearn sliding-windows connectome brain-connectivity functional-connectivity gpflow network-neuroscience time-varying-connectivity dynamic-functional-connectivity wishart-processes dynamic-conditional-correlation fcest mgarch
-
Updated
Dec 31, 2025 - Python
Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data
python neuroscience spectrogram electrophysiology coherence frequency-domain brain-connectivity multitaper connectivity-measures canonical-coherence phase-lag-index spectral-granger-causality global-coherence
-
Updated
Nov 7, 2025 - Python
The Brain Activity Flow ("Actflow") Toolbox. Tools to quantify the relationship between connectivity and task activity through network simulations and machine learning prediction. Helps determine how connections contribute to specific brain functions.
machine-learning neural-networks neuroimaging simulations fmri brain-connectivity brainweb activity-flow
-
Updated
Mar 17, 2025 - Python
Pythonic implementation of the Phase Transfer Entropy method using NumPy and SciPy
-
Updated
Oct 31, 2024 - Python
A differentiable program for mapping brain function
time-series image-processing neuroimaging fmri brain-imaging brain-connectivity differentiable-programming
-
Updated
Oct 25, 2024 - Python
Sparsely Reconstructed Graphs (SpaRG) for robust and interpretable fMRI analysis using GNNs and VAEs.
deep-learning vae neuroimaging fmri brain-connectivity generalization resting-state-fmri fmri-roi-analysis sparsification gnn connectomes
-
Updated
Sep 22, 2024 - Python
A Reproducible Workflow for Structural and Functional Connectome Ensemble Learning
workflow optimization networkx ensemble-learning networks fmri decision-trees nilearn fuzzy-logic multiverse brain-connectivity tractography nipype dipy gridsearch graph-neural-networks dmri ensemble-sampling
-
Updated
Feb 1, 2024 - Python
PyPDC is a Python package to perform asymptotic Partial Directed Coherence estimations for brain connectivity analysis.
-
Updated
Nov 5, 2023 - Python
Diffusion-based Graph Super-resolution
-
Updated
Oct 24, 2023 - Python
How to fuse a population of graphs into a single one using graph neural networks?
machine-learning-algorithms network-analysis cbt brain-connectivity geometric-deep-learning brain-networks graph-neural-networks gnn network-integration network-fusion graph-fusion graph-integration brain-gnn atlas-learning
-
Updated
Oct 24, 2023 - Python
Federated Multimodal and Multiresolution Graph Integration
cbt brain-connectivity network-neuroscience connectional-brain-template mutligraph-integration federated-fusion multimodal-data-fusion graph-data-fusion multi-resolution-graph-fusion
-
Updated
Sep 8, 2023 - Python
Napari-based 3D cell segmentation software using machine learning predictions as inputs, especially for EM image stacks of brains
-
Updated
Aug 31, 2023 - Python
Regression Graph Neural Network (regGNN) for cognitive score prediction.
regression brain-connectivity symmetric-positive-definite network-neuroscience riemannian-manifold graph-neural-networks gnn sample-selection cognitive-score matrix-parallel-transport geodesic-transport
-
Updated
Apr 19, 2023 - Python
StairwayGraphNet for inter- and inter-modality graph superresolution.
deep-learning predictive-modeling brain-connectivity adversarial-learning structural-mri gnns graph-neural-networks multi-modal-imaging graph-superresolution generative-learning functional-mri
-
Updated
Apr 7, 2023 - Python
MultiGraphGAN for predicting multiple target graphs from a source graph using geometric deep learning.
generative-adversarial-network gan graph-generation brain-connectivity predictive-learning geometric-deep-learning multimodal-deep-learning multi-view-learning brain-graphs predictive-intelligence source-graph target-graph morphological-brain-networks
-
Updated
Apr 2, 2023 - Python
Federated time-dependent graph evolution prediction with missing timepoints.
missing-data longitudinal-data graph-generation brain-connectivity brain-network predictive-learning federated-learning graph-neural-networks gnn graph-synthesis network-prediction
-
Updated
Mar 23, 2023 - Python
Predicting multigraph brain population from a single graph
deep-learning network-analysis connectomics brain-connectivity predictive-learning geometric-deep-learning network-neuroscience medical-dataset brain-networks graph-neural-networks gnn graph-augmentation generative-learning multigraph-generation brain-mapping
-
Updated
Dec 10, 2022 - Python
Improve this page
Add a description, image, and links to the brain-connectivity topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the brain-connectivity topic, visit your repo's landing page and select "manage topics."