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bruker
Here are 51 public repositories matching this topic...
spxtacular is a Python library for mass spectrometry spectrum processing. It provides a chainable Spectrum API covering the full centroid-to-neutral-mass pipeline: denoising, isotope deconvolution, neutral mass conversion, fragment matching, and PSM scoring.
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Apr 13, 2026 - Python
A Python package to extract MS/MS spectra from Bruker TimsTOF .D folders and convert them to standard formats (MS2, MGF, and mzML).
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Apr 10, 2026 - Python
Python package for parsing Bruker timsTOF data with centroiding and noise filtering
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Apr 10, 2026 - Python
A modern Python library for converting Mass Spectrometry Imaging (MSI) data into standardized SpatialData/Zarr format, enabling seamless integration with spatial omics analysis workflows.
bioinformatics scientific-computing mass-spectrometry msi bruker data-conversion imzml omics-data-integration mass-spectrometry-imaging zarr spatialdata spatial-omics m4i-cuypers-group ecuypers-group
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Mar 24, 2026 - Python
Running PROFFAST with Python.
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Mar 20, 2026 - Python
AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquired with Bruker instrument.
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Mar 18, 2026 - Python
Pyra: Automated EM27/SUN Greenhouse Gas Measurements
python cli typescript monitoring climate sensor autonomous opus emissions spectroscopy hacktoberfest bruker mypy tauri tailwindcss docusaurus em27 camtracker
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Mar 11, 2026 - Python
Professional Python toolkit for EPR spectroscopy data analysis. Load Bruker files, apply baseline correction, analyze lineshapes, and convert to FAIR formats. Complete CLI suite with comprehensive testing.
python open-source signal-processing scientific-visualization scientific-computing fair spectroscopy bruker electron-paramagnetic-resonance fair-data epr lineshape-simulation baseline-correction
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Feb 26, 2026 - Python
Python library to handle Scanning Probe Microscopy Images. Can read nanoscan .xml data, Bruker AFM images, Nanonis SXM files as well as iontof images(ITA, ITM and ITS).
python afm python-library sfm image-processing stm spm principal-component-analysis bruker iontof tof-sims nanoscan nanonis sxm nanonis-sxm
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Feb 11, 2026 - Python
PySSPFM: A specialized tool for Switching Spectroscopy Piezoresponse Force Microscopy (SSPFM) data processing
python map afm python-library datacube spm bruker hysteresis pfm piezoelectric nanoloop ferroelectric pysspfm ss-pfm c-kpfm switching-spectroscopy piezoresponse
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Jan 7, 2026 - Python
Automated deconvolution of Bruker mass spectra datasets using UniDec
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Nov 26, 2025 - Python
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Nov 24, 2025 - Julia
A python package for communicating with Bruker OPUS spectroscopy software and reading its binary file format.
python reflection transmission opus spectra spectroscopy bruker raman absorption ftir raman-spectroscopy bruker-opus interferograms ftir-data-analysis
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Nov 14, 2025 - Python
3D T2 mapping based on accelerated MESE with a subspace constrained reconstruction
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Nov 4, 2025 - Julia
A GUI to convert Bruker Raw files (.d) to an .ms2 file format
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Oct 20, 2025 - Python
Bash script for automatic renaming of Bruker NMR datasets with problematic names (ending-in-a-period, identical-to-another-except-for-case) once the data is finished acquiring.
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Oct 10, 2025 - Shell
Bash script for monitoring ICON-NMR sessions on multiple NMR instruments and sending emails to the NMR manager and/or users when things go wrong.
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Oct 10, 2025 - Shell
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