🧬 Build and train small language models from scratch on AMD GPUs with ROCm, featuring tokenizer training, data prep, and Hugging Face deployment.

Processing and visualization tools for quantitative MRI data

DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

The DIPY Workshop website

📔 Online Kurz Vedenie Bakalárskych a Diplomových Prác + DPŠ

ElikoPy is Python library aiming at easing the processing of diffusion imaging for microstructural analysis.

Slice module to offer the Diffusion Complexity Map algorithm

GNU R package for reading and writing neuroimaging file formats. Not limited to FreeSurfer anymore, despite its name.

R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphometry data for individuals and groups.

Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集

analysis of brain scans in MATLAB using techniques like DTI [diffusion tensor imaging]

This study investigates the impact of maternal HIV status on child brain development via immune changes. It explores if peripheral blood immune trajectories link to neuroimaging and neurodevelopmental alterations in children with perinatal HIV exposure.

diffusion tensor image analysis along the perivascular space (DTI‐ALPS) ：a program package for calculating DTI-ALPS

DEHBARA (Efficio) is a React and Express-based web application designed to streamline service requests for DTI, SSS, and other document processing needs. It simplifies the process of requesting official papers and services, integrating cloud storage for efficient data management.

MRI preprocessing and analysis pipelines and tools for the study of disorders of consciousness

Predictive Modelling of Drug Target Interaction: CNN/MPNN/Transformer

🧠 DTI-NODDI: Create NODDI maps from DTI (either "FA and MD" or "L1, L2, and L3")

Handling of structural neuroimaging file formats for Julia.

The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from visualization and interactive exploration