A comprehensive microbial genomic analysis pipeline that includes quality control, gene prediction, annotation, and comparative genomic analysis for identifying and visualizing key genetic features in microbial genomes.

This project deals with predicting the location of a gene in the human genome based off experimental data

EMBLish aims to provide a tool for converting gene prediction files such as Maker output file and gene annotation files such as Pannzer2 output file into the EMBL format

Pipeline for de novo genome assembly and annotation of the earthworm Lumbricus terrestris.

Pogigwasc gene prediction of Loxodes magnus genome

automatically create GLIMMER training materials from GenBank records

Spurious PROtein Unprediction Tool

Prokaryotic gene prediction using Shine-Dalgarno motif and reading frame detection 🦠

🔮🧬 Gene prediction tool

Pipelines for gene and TE annotation of pangenomes.

Genome Annotation: Hands-on Training

Comprehensive genome annotation pipeline for plant combining EVM/PASA, GETA, AUGUSTUS and Helixer with semi-supervised filtering for high-quality gene models.

PredGenesGetPepts is an easy-to-use, beginner-friendly pipeline to call genes from fasta files, retrieve peptides and blasting them against a given protein database

Cpp Programs for feature extraction

Gene Prediction Meta Server is a project that aims to bring multiple offline gene prediction tools online and integrating them into a single online platform in a user-friendly way. The related video link is attached.

Using un-assembled genome sequence data from the Centers for Disease Control and Prevention (CDC) proceed through five distinct stages of analysis and interpretation of that data: 1-genome assembly, 2-gene prediction, 3-functional annotation, 4-comparative genomics and 5-production of a predictive webserver.

A toolkit for identifying gene homologs in closely related species.