AUIR: A high-throughput analysis pipeline for influenza sequence data

Deployable code for the influenza webapp.

Forecast and explorative analysis of the number of influenza infections in Germany.

RECDS identifies cluster-transition determining sites underlying the antigenic evolution of seasonal influenza viruses

Analysis of Emergency Deparment Visits and Admissions for Influenza-like Illness and/or Pneumonia in New York City

A Python script that sends Italian flu updates to Mastodon

Prediction infectious strains of Influenza A virus for human

Heatmap showing the number of deaths month to month since the beginning of the pandemic.

TDP-43 motifs in the GISAID Database

MPH Capstone Data Management & Analysis

Pipeline for analyses of multiple pathogens, like SARS-CoV-2 with positivity rate analyses

This project analyzes the weekly data on Influenza Type A and Type B cases in the US for the period 2023-24.

本项目开发了一个基于机器学习的禽流感病毒(H5N1)预测系统，旨在通过分析历史数据和实时社交媒体信息，对禽流感疫情进行预测和风险评估。该系统采用决策树算法结合 SMOTE 过采样技术，实现了对不平衡数据的有效处理和高精度预测。

Access the GISAID Flu database using Python

Genome ANnotator for inFLUenza viruses

inFLuenza Amino acid Substitution Caller

Implementación computacional de cebadores y sondas (HA, NP y M1-M2) de Influenza A H1N1 para RT-PCR // Computational implementation of primers and probes (HA, NP, and M1-M2) for Influenza A H1N1 for RT-PCR.

MIRA: Portable, Interactive Application for High-Quality Influenza, SARS-CoV-2 and RSV Genome Assembly, Annotation, and Curation

NGS pipeline for influenza virus libraries