Interpretable spatial graph framework integrating pathway and ligand–receptor priors with tissue architecture. Generates pathway maps and H&E overlays that reveal how tumors organize and rewire signaling in space.

A quick and dirty virtual screening task for potential ligands of Flavobacterium johnsoniae Tyrosine Ammonia Lyase (FjTAL)

Cell-Cell Interaction Discovery in Single Cell RNA Sequencing

Intercellular communication analysis for scRNA-seq data

Ligand-Receptor Analysis for scRNAseq data

LIANA x Tensor-cell2cell Protocols

A manually curated database of literature-supported ligand-receptor interactions in human and mouse

DrugHIVE: Structure-based drug design with a deep hierarchical generative model

MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data

LIANA+: an all-in-one framework for cell-cell communication

LIANA: a LIgand-receptor ANalysis frAmework

NicheNet: predict active ligand-target links between interacting cells