A small pipeline for assembling mitochondrial genomes and filtering reads prior to assembly.

Source code for the HmtVar database, with a sample of the actual data to play with it locally.

Undergraduate Research Thesis Project for MHI 4980E at Western University

Mechanistic QSAR models for key human health endpoints

Taxonomic classification and read binning of mitochondrial DNA

Complements mitoSim - the simulator of cell mitochondria as a spacelss graph.

R scripts for the analysis of mitochondria traces

A simple, step-by-step guide to applying self-supervised learning techniques to a mitochondria segmentation task using PyTorch.

Practice lesson for NGS Data Analysis

Repository for proteomic data analysis used in the publication "Extreme Acetylation of the Cardiac Mitochondrial Proteome Does Not Promote Heart Failure."

Original: https://github.com/stevengogogo/RetroSignalModel.jl

Fall 2022 Bioengineering 298 Final Project: using protein networks to understand drug and disease mechanisms

Women in Mitochondria

Repository for proteomic data analysis used in the publication "Disruption of acetyl-lysine turnover in muscle mitochondria promotes insulin resistance and redox stress without overt respiratory dysfunction."

Contamination detection workflow based on mtDNA

Spatiotemporal bioenergetics in the cardiac cell

This repository contains all the code used for the publication "Morphological principles of neuronal mitochondria".

Paper - Endocrine disruption from plastic pollution and warming interact to increase the energetic cost of growth in a fish

A mitochondrial analysis tool for the vEM dataset.