Collection of scripts for resting-state fMRI analysis
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Mar 20, 2014 - Python
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neuroimaging-analysis
Here are 21 public repositories matching this topic...
Simulations for Open, Reproducible Imaging Genetics Neuroscience
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Nov 21, 2019 - Python
Pypelines Utilizing a Modular Inventory
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Sep 12, 2022 - Python
Pre-clinical DSC-MRI perfusion map generator written in Python
python python-script neuroscience python3 mri neuroimaging neuroimaging-analysis mri-brain brain-perfusion dsc-mri
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Jun 2, 2023 - Python
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Apr 22, 2024 - Python
Analysis of the EEG LEMON and MEG CamCAN datasets
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Jul 20, 2024 - Python
Analysis of the NTAD dataset
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Jul 20, 2024 - Python
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Nov 13, 2024 - Python
Python implementation of various Brainstorm functions, often written for GPU or jit speed-up.
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Mar 25, 2025 - Python
Current code for my hippocampal morphometry workflow, based on the hippodeep_pytorch segmentation program and the SlicerSALT shape analysis software.
python bash neuroimaging morphometrics fsl morphometry hippocampus neuroimaging-analysis shape-analysis 3d-slicer-extension spharm
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May 14, 2025 - Python
Scripts for the Cho et al. (2024) manuscript
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Aug 28, 2025 - Python
Early detection of Alzheimer’s disease using hippocampal ROI extraction, correlation with MNI atlas, and Fourier-based frequency analysis. Includes scripts for reproducible MRI image processing and feature analysis.
mri medical-imaging feature-extraction alzheimers-disease hippocampus neuroimaging-analysis fft-analysis
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Jan 6, 2026 - Python
A set of tools for medical imaging processing and analysis that I have been crafting over the years.
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Jan 20, 2026 - Python
Towards Modality-Agnostic Continual Domain-Incremental Brain Lesion Segmentation
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Jan 24, 2026 - Python
Scripts for the Cho et al. (2025) manuscript
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Feb 17, 2026 - Python
Pythonic pipeline for detecting avalanches and assessing criticality from rs-fMRI.
avalanche criticality neuroimaging-analysis rs-fmri adjacency-matrix-graph neuronal-avalanches brain-criticality
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Feb 22, 2026 - Python
3D motion correction and motion analysis for microscopy videos
motion neuroimaging optical-flow motion-correction microscopy 3d volumetric-data 2-photon neuroimaging-analysis volumetric-video
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Apr 30, 2026 - Python
Scripts for the Cho et al. (2026) manuscript
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Mar 31, 2026 - Python
"EEG-to-brain voxelization using hybrid information-theoretic methods (work in progress)"
eeg computational-neuroscience neuroimaging phyton neuroimaging-analysis fmri-data-analysis neurosicence computational-neuroimaging
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Apr 1, 2026 - Python
Neuroimaging analysis in Python
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Apr 11, 2026 - Python
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