pymol

P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.

AI-Powered Bioinformatics Research Assistant. Built on OpenClaw.

Pymol-open-source wheels for Python on Windows.

PyMOL extension to color AlphaFold structures by confidence (pLDDT).

💊 AI Research Assistant for Accelerated Drug Discovery. 🦞

Rapid generation of high-quality structure figures for publication with PyMOL-PUB

The repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websearches from within PyMOL as well as many other convienent functions that make work in PyMOL more productive..

A Consensus Docking Plugin for PyMOL

PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.

(Linux and macOS) AMDock: Assisted molecular docking with AutoDock4 and AutoDockVina

(Windows) AMDock: Assisted molecular docking with AutoDock4 and AutoDockVina

3D hotspot mutation proximity analysis tool

A PyMOL plugin for visualizing vibrations in molecules and solids

molecular dynamics simulation and analysis. 分子动力学模拟和分析。

Pymolsnips is a library of PyMOL scripting language code fragments for several popular text editors.

Control PyMOL with natural language prompts using an LLM to make better figures, analyze structures, and more...

protein utilities in Rust

Python code to color a PDB structure based on parameters from a multiple sequence alignment

Generate Boltzmann-weighted Sterimol Steric Parameters for Conformationally-Flexible Substituents

This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua