satijalab / seurat
R toolkit for single cell genomics
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R toolkit for single cell genomics
R's data.table package extends data.frame:
R package for detecting doublets in single-cell RNA sequencing data
NicheNet: predict active ligand-target links between interacting cells
Accurate sample inference from amplicon data with single nucleotide resolution
Repository for Programming Assignment 2 for R Programming on Coursera
Fast, sensitive and accurate integration of single-cell data with Harmony
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
Inferring CNV from Single-Cell RNA-Seq
renv: Project environments for R.
Tree-sitter grammar for R
Automated nflverse data repository
dplyr: A grammar of data manipulation
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
🎓 A collection of interactive courses for the swirl R package.
R toolkit for the analysis of single-cell chromatin data
Dynamic Documents for R
Easy interactive web applications with R
Simple Features for R
📊 A universal enrichment tool for interpreting omics data