swirldev / swirl_courses
🎓 A collection of interactive courses for the swirl R package.
See what the GitHub community is most excited about today.
🎓 A collection of interactive courses for the swirl R package.
R toolkit for single cell genomics
R's data.table package extends data.frame:
An implementation of the Grammar of Graphics in R
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
Community-provided extensions to Seurat
Inferring CNV from Single-Cell RNA-Seq
Interfaces for HDF5-based Single Cell File Formats
Dynamic Documents for R
dplyr: A grammar of data manipulation
R toolkit for the analysis of single-cell chromatin data
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
Simple Features for R
A Wes Anderson color palette for R
R package for detecting doublets in single-cell RNA sequencing data
renv: Project environments for R.
Fast, sensitive and accurate integration of single-cell data with Harmony
Survival Analysis and Visualization