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Applied Computational Genomics Course at UU: Spring 2020
Tutorials on phylogenetic and phylogenomic inference
Static and dynamic network visualization with R - code and tutorial from Sunbelt 2019 workshop.
Generate an interactive dot plot from mummer or minimap alignments
Bioinformatics Workbook repository
Short lessons from FAS Informatics coffee hour
📗handbook of biostatistic and R
Examples of application of comparative methods in R
Analysis of convergence between organismal traits and DNA/protein sequences
This tutorial runs through the basics of ggplot2 and how to make a figure ready for publication.
Download, integration and visualizations of the variety & volume of TCGA data.
Biostatistics - Why? What? How?
Web-site for the 2020 CRUK CC Bioinformatics Summer School (Held virtually)
Gennome annotation scripts for the crickets Gryllus bimaculatus and Laupala kohalensis.
Comparative genomics of obligate brood parasite and closely related species in Anatidae
Workshop on phylogenies and statistics given at the QCBS Biodiversity intensive course
Workflow for analysis of prairie rattlesnake W chromosome assembly
Teaching materials for Methods in Macroecology & Macroevolution Masters course
This is a compilation of the scripts I used for genome assembly using long read sequencing data
Book website: STILL UNDER DEVELOPMENT
Materials for the biological statistics using R section of evomics 2019 workshop.
Half-day workshop on phylogenetic comparative methods
Materials for seminar course on Macroevolution and Lineage Diversification
Snakemake Implementation of RecSearch featured in "Pervasive duplication of tumor suppressors in Afrotherians during the evolution of large bodies and reduced cancer risk"
Home of the analysis for the publication "Pervasive duplication of tumor suppressors in Afrotherians during the evolution of large bodies and reduced cancer risk"