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10 stars written in Java
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《Hello 算法》:动画图解、一键运行的数据结构与算法教程。支持简中、繁中、English、日本語,提供 Python, Java, C++, C, C#, JS, Go, Swift, Rust, Ruby, Kotlin, TS, Dart 等代码实现

Java 122,109 14,822 Updated Jan 23, 2026

Gephi - The Open Graph Viz Platform

Java 6,351 1,595 Updated Jan 11, 2026

拙著『「アルゴリズム×数学」が基礎からしっかり身につく本』(2021/12/25 発売)の GitHub ページです。演習問題の解答や、C++ 以外のソースコードなどが掲載されています。ぜひご活用ください。

Java 1,127 102 Updated Aug 11, 2022

A quality control analysis tool for high throughput sequencing data

Java 577 107 Updated Jan 5, 2026

Automatically exported from code.google.com/p/figtree

Java 456 115 Updated Jun 25, 2025

Accurate Species TRee ALgorithm

Java 271 69 Updated Apr 1, 2024

Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation

Java 261 77 Updated Dec 19, 2025

Bayesian Evolutionary Analysis Sampling Trees

Java 234 80 Updated Feb 4, 2026

Dendroscope program for analyzing and visualizing rooted phylogenetic trees and networks

Java 47 6 Updated Apr 28, 2025

Spatial Phylogenetic Reconstruction of Evolutionary Dynamics 3

Java 17 7 Updated Apr 28, 2023