⚡ ♒ Rapid prokaryotic genome annotation

✂️ ⚡ Rapid haploid variant calling and core genome alignment

Another Gtf/Gff Analysis Toolkit https://nbisweden.github.io/AGAT/

🔎 💊 Mass screening of contigs for antimicrobial and virulence genes

⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads

Any Way to Show Multi genomic Synteny

🐉 🪰 Assemble bacterial isolate genomes from Nanopore reads

GET_HOMOLOGUES: a versatile software package for pan-genome analysis

Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data

The Prokaryotic Genomics and Comparative Genomics Analysis Pipeline

A k-mer based program for the identification of known plasmids from whole-genome sequencing reads

The standalone toolkit for generating PSSM-based features for machine learning based protein sequence analysis.