R package for extracting and visualizing mutational patterns in base substitution catalogues

A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.

R interface to the IEU GWAS database API

The bridge between the NCBI Gene Expression Omnibus and Bioconductor

Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.

Gene regulatory network containing signed transcription factor-target gene interactions

The goal of `ggVolcano` is to help users make a beautiful volcano map more easily, including general volcano plot(`ggvolcano`), gradient color volcano plot(`gradual_volcano`) and GO term volcano pl…

🍪 SEnsible Step-wise Analysis of DNA MEthylation BeadChips

Collection of cell type reference datasets.

Reactome Pathway Analysis

New user

Bioconnector Workshops

Comprehensive tutorial for differential methylation analysis, differential variability analysis and integrative analysis

LorMe package for R：Lightening One-code Resolving Microbial Ecology Program

Codes to regenerate figures for mutagen paper

Complex Layout of Grid Graphics Made Simple

Chimeric transcript discovery

Venn diagrams with directionality (concordance), optional display of items inside the figure, text Venn diagrams

Introduction and protocol of GWAS

❗ This is a read-only mirror of the CRAN R package repository. survRM2 — Comparing Restricted Mean Survival Time

Automated Pipeline to run SeSAMe Analysis on MM285 Methylation Array

Modular Nextflow pipeline for bulk RNA-Seq analysis with containerized QC, quantification, and downstream functional genomics workflows.