Source code for Strober lab website

A comprehensive tutorial about GWAS and PRS

HuixiangDou: Overcoming Group Chat Scenarios with LLM-based Technical Assistance

MEGAnE

Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium. These files can be used as standard resource of BED files …

A list of useful bioinformatics resources

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Deep learning framework for SV calling and genotyping

Powerful statistics for VCF files

a python extension of CNVnator -- a tool for CNV analysis from depth-of-coverage by mapped reads

Check strandedness of RNA-Seq fastq files

The complete sequence of a human genome

Pro Gi­t 第二版 ­简体中文

Evaluating genome assemblies

fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"

Pangenome-based genome inference

Reference-based variant calling pipeline for a pair of phased haplotype assemblies

Tutorial for STAR-Fusion, FusionInspector, and de novo reconstruction of fusion transcripts using Trinity

常用英语词汇表

Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcinoma Associated with Clinical Outcome Identified Using Single…

R toolkit for single cell genomics

Scripts for running multi-phenotype GWAS using mixed models with the R package "rrBLUP". Additional functionality includes phenotype transformations and enrichment of a-priori candidate genes.

Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics

Intro to ChIPseq using HPC