Whole genome sequence simulation of DUF1220 domains and testing of alignment strategies

Scripts and tools used to analyse mitochondrial sequence variations between to strain of sea-lice (Lepeophtheirus salmonis)

A utility to convert chromosome coordinates between different assemblies.

Hands-on Introduction to Data Analysis for Genomics and Transcriptomics

Deep Rapid Annotation using Submodels Training in Cells

A VSM-dictionary that communicates with Ensembl genome data for non-vertebrate species through the EBI Search API

[Xanthomonas campestris pv. campestris 8004] GCModeller genomics Modelling Project

VAMPhyRE: Virtual Analysis Method for Phylogenomic fingeRprint Estimation

A simple python implementation of Variant Call Format intersection and complements for identifying genetic mutations

Codes for bacterial genome characterization, including feature parsing, 16S rRNA sequence extraction, and genome map input (Proksee)

Data Analysis for Genomics, FASTQ File Structure and Analysis using Python.

Pipeline to prepare alignments for visualization with ACT (goo.gl/1T28jX) and for locating possible inter-chromosomal re-arrengments/misjoints

Check the unusual breaks detail in assembled genome

Archive Donwload from NCBI Database (ADND) is a program for donwloading data from the NCBI database. Currently still in development

to adjust an old reference genome

🛠️🧬De Bruijn graph-based genome assembler📈📊

Codes i wrote for the paper "genomic resources for Mediterranean fishes"

For the paper describing the MIKK Panel and its genome