A simple python implementation of Variant Call Format intersection and complements for identifying genetic mutations

Codes for bacterial genome characterization, including feature parsing, 16S rRNA sequence extraction, and genome map input (Proksee)

Mapping And Prediction of Shared Elements in Alignments

Prediction of the binding sites of multiple transcription factors in a whole genome

(dockerized) dna2vec: Consistent vector representations of variable-length k-mers

Small python tool for in-scale drawings viruses genome scemes

Scrapes all the results of all the genome analysis performed by MiGA Online web tool and wirte them in a file.

Archive Donwload from NCBI Database (ADND) is a program for donwloading data from the NCBI database. Currently still in development

De Bruijn graph-based genome assembler 🛠️

Data Analysis for Genomics, FASTQ File Structure and Analysis using Python.

Retrieve and create a custom BLAST database by taxonomic search

Snakemake workflow for the assembly and evaluation of bovine genomes.

Python module and scripts to analyse CRISPRs and off-targets from a genome

The very first edition of LIN assignment database

FASTAr (FASTA Processor)

SimulaTe RestrIction Profile

BVBRC_GenomeDataDownloader 是一個 Python 腳本，用於從 BV-BRC 的 FTP 網站上批量下載和處理不同病症的基因組資料，並將它們轉換為 Roary 的輸入格式。

Expanded version of the traditional Smith Waterman algorithm for local alignment

🔬 Genomic growth in Silico 🔬(Python)

A Python package for extracting minimizers from sequence data