An easy pipeline to analyze data with Salmon.

Behavioral and Transcriptomic Analyses of mecp2 Function in Zebrafish

qSVA adapted for 2 brain regions as part of the BrainSeq Phase II project

Impartido para estudiantes de posgrado, Curso de Heladia Salgado

Análisis genómicos y transcriptómicos con plataforma NGS

HER2-Amplified vs Non-Amplified Breast Cancer Transcriptome Analysis (TCGA BRCA): Differential Expression, Pathway Enrichment, and Lasso-Cox Survival Stratification

Example analyses using recount

Workflow for Transcript, Gene, and Gene Set network analysis 🧬📊✨

Supplementary material for regionReport paper

Analysis of bulk RNA seq and sc-RNA seq data for https://doi.org/10.1186/s12915-025-02138-6.

Reproduce bioinformatics analysis for the manuscript: Muthel et al, 2019.

Submission for the Bioinformatics Peer Prize 2018

In the past several months, I have been having multiple interview done. Almost all the HM gave me some kind of challenge projects/analysis work. All were performed using public available datasets. Topics are mostly very diverse. Essence are all the same. How to utilize genomics/bioinformatics approaches to tackle a certain question, mostly biolo…

Template R code for bioinformatics analysis pipeline of transcriptomic Illumina datasets

A book that discusses topics and contains tutorials relevant to population genomics