adegenet: a R package for the multivariate analysis of genetic markers

Programs to analyse NGS data for population genetics purposes

An R package of map layers for British Columbia

🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction

RADseq workflow using STACKS

Rank-based Gene Ontology analysis of gene expression data

Simple and flexible manipulation of genomic data.

Pipeline for GTseq genotyping and quality control

efficient sampling for close-kin mark recapture power estimation

Pipeline to analyze eDNA metabarcoding samples (PE and SE, demultiplexed, multiplexed)

A short analysis of population statistics given specific inputs

R package for handling microhaplotypes

view and locate recombinations positions using pedigree data

For characterization of residually tetrasomic regions as in https://doi.org/10.1534/g3.120.401497

Tools for working with amplicon sequencing data

Scripts to run gene ontology enrichment

A (relatively) simple R script to convert a large genepop file into a Bayescan infile; based on several functions from the diveRsity R package.

Functions for manipulating microhap (and other genotype) data developed for EFGL

genome reduction sequences quality control

R scripts to convert Stacks haplotype output to a genepop file for use in diveRsity