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Pull requests list

Update build/test instructions to match README
#4278 by peterjc was merged Apr 23, 2023 Loading…
3 tasks done
Fix auth_residues=False for MMCIFParser
#4277 by jgreener64 was merged Apr 5, 2023 Loading…
3 tasks done
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Catch bad GenBank location failing regex
#4275 by peterjc was merged Apr 5, 2023 Loading…
3 tasks done
Update calculation of secondary structure fraction
#4273 by arpansahoo was merged Apr 21, 2023 Loading…
3 tasks done
Update secondary_structure_fraction calculation
#4272 by arpansahoo was closed Apr 1, 2023 Loading…
3 tasks done
Fix failing open file mode is binary check in Bio/bgzf.py
#4270 by terrycojones was merged Apr 6, 2023 Loading…
1 task
Phylo.Tree to igraph Graph
#4264 by iosonofabio was merged Jan 3, 2024 Loading…
3 tasks done
fix misleading comment in CompoundLocation.end documentation.
#4261 by seanrjohnson was merged Mar 12, 2023 Loading…
3 tasks done
Standardize on import numpy as np
#4259 by BabaYaga1221 was merged Mar 23, 2023 Loading…
3 tasks done
Numpy standardize
#4258 by pvalle6 was merged Apr 23, 2023 Loading…
3 tasks done
Numpy standardize /Doc
#4255 by pvalle6 was merged Mar 8, 2023 Loading…
3 tasks done
Standardized import numpy as np in Doc/Tutorial
#4254 by Aum8 was closed Mar 8, 2023 Loading…
1 of 3 tasks
Update .flake8 to ignore Bugbear's new B028
#4253 by MarkusPiotrowski was merged Mar 3, 2023 Loading…
2 of 3 tasks
context manager for Bio.Align.parse
#4251 by mdehoon was merged Mar 2, 2023 Loading…
3 tasks done
Fix typos
#4247 by kamurani was merged Feb 28, 2023 Loading…
3 tasks done
Alignments rewind
#4246 by mdehoon was merged Feb 28, 2023 Loading…
3 tasks done
Alignments iterator
#4245 by mdehoon was merged Feb 26, 2023 Loading…
3 tasks done
Standardized import numpy as np
#4242 by PaarthAgarwal was closed Apr 23, 2023 Loading…
2 of 3 tasks
Fix DNA_NN4 thermodynamic table
#4240 by vladkuz-vk was merged Mar 6, 2023 Loading…
3 tasks done
Update headers to 1.82.dev0
#4234 by JoaoRodrigues was merged Feb 13, 2023 Loading…
Commit Release 1.81
#4233 by JoaoRodrigues was merged Feb 13, 2023 Loading…
fix formatting for .pic file seq line in Tutorial
#4230 by rob-miller was merged Feb 8, 2023 Loading…
3 tasks done
tweak 1.80 and 1.81 internal_coords announcements
#4222 by rob-miller was merged Jan 25, 2023 Loading…
3 tasks done
Simple counts() method for pairwise alignments
#4221 by peterjc was merged Jan 25, 2023 Loading…
3 tasks done
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