Solve puzzles. Learn CUDA.

this repository accompanies the book "Grokking Deep Learning"

Examples of using deep learning in Bioinformatics

GWAS Tutorial for Beginners

Demo applications showcasing DJL

Genomic Pre-trained Network

Mondo Disease Ontology

Bias factorized, base-resolution deep learning models of chromatin accessibility (chromBPNet)

Deep learning framework for SV calling and genotyping

Rust bindings to minimap2 library

The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.

https://filippob.github.io/introduction_to_gwas/

LaBranchoR predicts RNA splicing branchpoints using a LSTM network. LaBranchoR uses only the sequence 1 to 70 base pairs upstream of a three prime splice site as a feature. In our paper, we show th…