📖 A collection of pure bash alternatives to external processes.

Docker implemented in around 100 lines of bash

A patch for GNU Core Utilities cp, mv to add progress bars

the pangenome graph builder

EDAM is an ontology of data analysis and data management in bio- and other sciences, and science-based applications. It comprises concepts related to analysis, modelling, optimisation, and data lif…

Pipeline for structural variant image curation and analysis.

SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel

An introduction to various methods/approaches for the analysis of peaks generated from ChIP-seq / CUT&RUN / ATAC-seq

Introme prioritises coding and noncoding splice-altering variants for clinical variant interpretation

Python deployment tool for bespoke image curation projects, oriented toward scientific projects. Please cite https://academic.oup.com/gigascience/article/7/7/giy064/5026174

Nextflow workshop at the Sanger Institute

Probabilistic method to predict causative rare variants in case-control studies using a popular probabilistic problem, the Birthday Model, which estimates the probability that a group of individual…