pacbio

Here are 8 public repositories matching this topic...

A phase-aware pharmacogenomic diplotyper for PacBio datasets

pacbio pharmacogenomics hifi

Error correction of long reads

nanopore assembly pacbio long-reads error-correction ploidy

Filter BAM file based on read mean QV, implemented in Rust

filter pacbio bam qc ont qv qv-filter

sequencing rnaseq pacbio longread ont

DWFA consensus algorithm for pb-StarPhase

consensus pacbio pharmacogenomics hifi

whittle: coordinate-consistent trimming of long-read uBAM and tagged FASTQ

rust bioinformatics nanopore genomics pacbio bam dna-methylation fastq long-read-sequencing base-modification

A fast, modular, streaming bioinformatics toolkit in Rust for FASTQ/FASTA/BAM — a platform that grows through modules, with strong long-read support.

rust cli streaming bioinformatics quality-control nanopore genomics ngs sequencing computational-biology pacbio fasta command-line-tool bam fastq long-reads long-read-sequencing

Trajectory-based long-read aligner with DP-free CIGAR generation

rust bioinformatics nanopore genomics alignment pacbio sequence-alignment long-reads minimap2

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