Making Protein folding accessible to all!

Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

Single cell RNA sequencing analysis course

Long read production pipelines

a spatial deconvolution method based on deep learning frameworks, which converts bulk transcriptomes into spatially resolved single-cell expression profiles

single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, hypergraph

A 3D genome data processing tutorial for ISMB/ECCB 2017

my 3D genome pipeline and scripts repository

Scripts for Lin, Y., Darolti, I., Furman, B. L. F., Almeida, P., Sandkam, B. A., et al., Breden, F., Wright, A. E., Mank, J. E. (2022) Gene duplication to the Y chromosome in Trinidadian Guppies. M…

The code for gray-whale transcriptomics paper

A 3D genome data processing tutorial for ISMB/ECCB 2017

Scripts for "The role of structural pleiotropy and regulatory evolution in the retention of heteromers of paralogs" by Axelle Marchant, Angel F. Cisneros, Alexandre K Dubé, Isabelle Gagnon-Arsenaul…