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7 stars written in Nim
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fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"

Nim 298 44 Updated Nov 14, 2025

A port of ggplot2 for Nim

Nim 187 16 Updated Apr 16, 2025

nim wrapper for htslib for parsing genomics data files

Nim 156 28 Updated Dec 15, 2025

don't get DUP'ed or DEL'ed by your putative SVs.

Nim 107 9 Updated Dec 14, 2020

Detect novel (and reference) STR expansions from short-read data

Nim 69 10 Updated Dec 6, 2025

find large indels (in the blind spot between GATK/freebayes and SV callers)

Nim 39 1 Updated Dec 3, 2017

Experimental getopt, gzip reader, FASTA/Q parser and interval queries in nim-lang

Nim 31 1 Updated Apr 20, 2020