Lists (28)
Advancing Julia
Repos that advance Julia as a compelling scientific programming language.53 repositories
AI-Assisted Engineering
Programming will never be the same.11 repositories
Bioinformatics
"Bioinformatics is terrible. Everybody knows bioinformatics is terrible...it’s not a good situation that we’re in."159 repositories
Biology in the Frontend
Interactive simulations, visualizations, and demos served in the browser.30 repositories
Command-line Utilities
Future-facing command-line tools written in innovative languages or that raise the bar in some other way.137 repositories
Data Visualization
Know your data by seeing it.82 repositories
Design as Code
3 repositories
Functional Programming
Writing composable, refactorable, and robust code with an FP paradigm62 repositories
Genomic epidemiology🦠🧬
7 repositories
Get started in Bioinformatics
Looking for inspiration to get started with making sense of noisy biological data? These repos punch above their weight.14 repositories
GIS
Spatial statistics, cartography, and other spatially explicit methods3 repositories
Gleam is cool
27 repositories
Glimpses of Jai
Early looks at the Jai programming language, which remains in closed beta1 repository
Go in Bioinformatics
Tools built in Go that can be interfaced with in the command line, or in Go source code.28 repositories
i use neovim, btw
we don't talk about vscode in this household7 repositories
Learning Me a Haskell
Finally giving in and learning Haskell—I may never be the same2 repositories
Metagenomics is hard :(
but fun?26 repositories
Python as a Glue Language
Python is beautiful...but slow. These tools help bring out its best side: as an elegant glue language connecting faster pieces of software.158 repositories
R in Science
"The best thing about R is it was designed by statisticians. The worst thing about R is it was designed by statisticians."43 repositories
Rust does all the things
Tools built in Rust that can be interfaced with in the command line, or in Rust source code.562 repositories
Scientific Reproducibility
Tools that make doing reproducible science—a very difficult task!—easier.16 repositories
Simulation & Testing
25 repositories
Software for Biodiversity
Software developed to help understand and solve the biodiversity crisis and advance our understanding of ecology and evolution in general.43 repositories
Standards for Excellent Programs
23 repositories
TUIs
I love TUIs and I don't care who knows it58 repositories
Turns out your app is a database
Repos that are explicitly--or accidentally--database projects.39 repositories
TypeScript Eats the World
We all give into TypeScript eventually...71 repositories
Workflow Orchestration
Tools for deploying many steps of dataflow across a variety of infrastructures11 repositories
Stars
5
stars
written in Nix
Clear filter
A Nix library for building cargo projects. Never build twice thanks to incremental artifact caching.
Functional highly reproducible bioinformatics pipelines