Lists (26)
Advancing Julia
Repos that advance Julia as a compelling scientific programming language.Another opportunity to bring up Rust
Tools built in Rust that can be interfaced with in the command line, or in Rust source code.Bioinformatics software...but good
"Bioinformatics is terrible. Everybody knows bioinformatics is terrible...it’s not a good sitaution that we’re in."Biology in the Frontend
Interactive simulations, visualizations, and demos served in the browser.Command-line Utilities
Future-facing command-line tools written in innovative languages or that raise the bar in some other way.Data Visualization
Know your data by seeing it.Design as Code
Functional Programming
Writing composable, refactorable, and robust code with an FP paradigmGenomic epidemiology🦠🧬
Get started in Bioinformatics
Looking for inspiration to get started with making sense of noisy biological data? These repos punch above their weight.GIS
Spatial statistics, cartography, and other spatially explicit methodsGleam is cool
Glimpses of Jai
Early looks at the Jai programming language, which remains in closed betaGo in Bioinformatics
Tools built in Go that can be interfaced with in the command line, or in Go source code.Learning Me a Haskell
Finally giving in and learning Haskell—I may never be the sameMetagenomics is hard :(
but fun?Python as a Glue Language
Python is beautiful...but slow. These tools help bring out its best side: as an elegant glue language connecting faster pieces of software.R in Science
"The best thing about R is it was designed by statisticians. The worst thing about R is it was designed by statisticians."Scientific Reproducibility
Tools that make doing reproducible science—a very difficult task!—easier.Simulations
A list that celebrates simulations' central role in biology and scientific computing writ large.Software for Biodiversity
Software developed to help understand and solve the biodiversity crisis and advance our understanding of ecology and evolution in general.Standards for Excellent Programs
TUIs
I love TUIs and I don't care who knows itTurns out your app is a database
Repos that are explicitly--or accidentally--database projects.TypeScript Eats the World
We all give into TypeScript eventually...Workflow Orchestration
Tools for deploying many steps of dataflow across a variety of infrastructuresStars
An extremely fast Python package and project manager, written in Rust.
Code at the speed of thought – Zed is a high-performance, multiplayer code editor from the creators of Atom and Tree-sitter.
A markup-based typesetting system that is powerful and easy to learn.
An extremely fast Python linter and code formatter, written in Rust.
Extremely fast Query Engine for DataFrames, written in Rust
Fullstack app framework for web, desktop, and mobile.
This is the Rust course used by the Android team at Google. It provides you the material to quickly teach Rust.
💥 Blazing fast terminal file manager written in Rust, based on async I/O.
A cross-platform GUI library for Rust, inspired by Elm
A terminal workspace with batteries included
egui: an easy-to-use immediate mode GUI in Rust that runs on both web and native
HTTP routing and request-handling library for Rust that focuses on ergonomics and modularity
a structural diff that understands syntax 🟥🟩
Open source comprehensive 2D content creation tool suite for graphic design, digital art, and interactive real-time motion graphics — featuring node-based procedural editing
🚀 Fast and simple Node.js version manager, built in Rust
A toolchain for web projects, aimed to provide functionalities to maintain them. Biome offers formatter and linter, usable via CLI and LSP.
Cross-platform Rust rewrite of the GNU coreutils
Slint is an open-source declarative GUI toolkit to build native user interfaces for Rust, C++, JavaScript, or Python apps.
Blazing 💥 fast terminal-ui for git written in rust 🦀
A high-performance observability data pipeline.
Create book from markdown files. Like Gitbook but implemented in Rust