Making some comparisons of NGS data

Example files for Benin NGS capacity building project

Galaxy YEP Qc & Viz workflow invocation scripts and input datasets

A genetic sequence analysis on calculating the GC contents and CpG deficiencies on multiple coronaviruses (SAR-CoV, SAR-CoV-2, MERS-CoV and 2 two bat derived SARS-like coronaviruses) to see which coronavirus has the most potentially effective mechanism to escape the anti-virus activities on human bodies.

deepEA: a containerized web server for interactive analysis of epitranscriptome sequencing data

🐳 Galaxy Docker repository for NGS Analysis

A Hugo-based deployment of biocomputeobject.org

A python package storing different tools for different NGS operations

Quality control and processing of NGS data

Teaching material used in the "Advanced Bioinformatics for Next-Generation Sequencing" class, University of Copenhagen, 2021

workflow and notes on large virus genome assembly and snp call using FastQC, Trimmomatic, bowtie2, and samtools.

A tool for deep statistical analyses and informative visualizations of complex -omic data

Whole-Genome-Sequencing analysis pipeline of Ascochyta rabiei isolates

Fast-polyvalent trimmer used for several applications of next-generation sequencing

This is Loan Robinson Github Page, which includes all tutorials for education purpose.

Webserver for storage [and analysis] of NGS-based HIVDR testing data

In this training course you will find theory and practice material for introducing yourself to wgs analysis for bacterial, including outbreak investigation.

🧐Handbook for NGS data analysis

NGS Data Processing Pipeline