R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)
Workshop • Intro to Bioinformatics using NGS data • 5 days
NGS Data Processing Pipeline
Teaching material used in the "Advanced Bioinformatics for Next-Generation Sequencing" class, University of Copenhagen, 2021
🐳 Galaxy Docker repository for NGS Analysis
workflow and notes on large virus genome assembly and snp call using FastQC, Trimmomatic, bowtie2, and samtools.
deepEA: a containerized web server for interactive analysis of epitranscriptome sequencing data
A Hugo-based deployment of biocomputeobject.org
Quality control and processing of NGS data
Whole-Genome-Sequencing analysis pipeline of Ascochyta rabiei isolates
Fast-polyvalent trimmer used for several applications of next-generation sequencing
SEAL db - Simple, Efficient And Lite database for NGS
A genetic sequence analysis on calculating the GC contents and CpG deficiencies on multiple coronaviruses (SAR-CoV, SAR-CoV-2, MERS-CoV and 2 two bat derived SARS-like coronaviruses) to see which coronavirus has the most potentially effective mechanism to escape the anti-virus activities on human bodies.
In this training course you will find theory and practice material for introducing yourself to wgs analysis for bacterial, including outbreak investigation.
Research projects conducted at the GeneMAP Research Center
This is Loan Robinson Github Page, which includes all tutorials for education purpose.
A tool for deep statistical analyses and informative visualizations of complex -omic data
Example files for Benin NGS capacity building project
Webserver for storage [and analysis] of NGS-based HIVDR testing data
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