WisecondorX — An evolved WISECONDOR

is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.

Genomic interval operations on Pandas DataFrames

Metagenomic pipeline and other general scripts used in the lab.

HemTools: a collection of NGS pipelines and bioinformatic analyses

SalmonTE is an ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances

Publication quality NGS track plotting

Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researchers from wet and dry lab to perform downstream Bioinformatics analysis

生物信息学项目实践仓库🏆🥇

SIB course that introduces analysis of NGS data

This RNAseq data analysis tutorial is created for educational purpose

A comprehensive R package to construct interactive and reproducible biological data analysis applications based on the R platform

Using combined evidence from replicates to evaluate ChIP-seq peaks

Project Manager for NGS data analysis

A set of CWL tools and workflows used by NCBI Computational Biology Branch for NGS data analysis

PlasmidID is a mapping-based, assembly-assisted plasmid identification tool that analyzes and gives graphic solution for plasmid identification.

群体遗传学分析中用到的script和skill等

GitHub for the SIB courses NGS - Genome variant analysis

R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)

Workshop • Intro to Bioinformatics using NGS data • 5 days